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traf2 c domain Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0095 0.8 -0.3 -0.2 -0.4 0.2 -0.7 -1 -0.2 -0.1 -0.1 1 0.6 -0.1 -0.1 -0.1 0.8 0.7 0.5 0.3 -0.9
Select residue pair below:
i_j Score Prob
0092_0095 1.232 0.98
0058_0095 1.154 0.97
0086_0095 1.113 0.96
0095_0125 0.837 0.80
0089_0095 0.806 0.76
0095_0134 0.783 0.73
0095_0170 0.767 0.71
0052_0095 0.727 0.65
Local Interactions:
i_j Score Prob
0094_0095 1.724 1.00
0095_0096 0.949 0.89
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D L A M ...

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