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traf2 c domain Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0015 0.2 -0.2 0.3 0.9 0.7 0.6 -0.8 -0.8 -0.1 -0.1 0 0.1 -0.1 -0.4 0 0.6 0.2 -0.4 -0.5 0
Select residue pair below:
i_j Score Prob
0015_0130 1.100 0.96
0015_0018 0.913 0.87
0015_0055 0.769 0.71
0015_0042 0.744 0.68
0015_0043 0.739 0.67
0015_0054 0.730 0.65
Local Interactions:
i_j Score Prob
0015_0016 2.077 1.00
0014_0015 1.701 1.00
0015_0017 1.396 0.99
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D L A M ...

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