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beps_core_with 4 iterations Return to Main Page

Instructions
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Coupling matrix for [H:0013] and [N:0078]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 0.3 0 -0.1 0.4 0 0 -0.1 0 0 -0.1 0 -0.1 0 -0.2 -0.1 0.2 0 0
F -0.1 0 -0.1 0 0 0.5 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
I -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
L 0.3 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 0 0.3 0 0
V -0.2 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 -0.2 -0.1 1.2 0 0
M -0.2 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 0 0.5 0 -0.1 0 -0.1 0 0.3 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
Y 0.2 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0.3 0 -0.1 0 0
D 1 -0.1 0.5 -0.2 0.3 0.2 -0.1 -0.1 -0.3 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 0.6 0.2 -0.2 -0.1 -0.3
E -0.6 0 0.4 -0.1 -0.2 0 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.2 0 0.4 0.7 0.1 0 0.4
K 0.3 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
H 0.2 0 -0.1 -0.1 -0.1 -0.1 0 0.2 -0.1 0 0 0 0.2 0.8 0 -0.2 -0.1 -0.2 0 0
N 0.9 -0.1 -0.3 0 0.3 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0.7 -0.1 0.7 -0.2 -0.6 -0.1 -0.1
Q -0.1 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
S -0.2 0 -0.1 0 1 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 0.2 0 -0.2 0 0
T 0.2 -0.1 0.4 0.6 -0.3 -0.2 -0.1 -0.1 1.4 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.5 -0.1 0.2 -0.1 -0.1
G -0.2 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.6 0 -0.1 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0013 0.2 -0.2 -0.5 0 0.1 0 -0.5 0 0.6 0.5 -0.2 -0.5 0.3 0.7 -0.4 0.3 1.1 -0.1 -0.5 -0.5
0078 1.7 -0.6 1 -0.1 0.4 0.2 -0.6 -0.5 0.2 -0.6 -0.6 -0.3 -0.5 0.3 -0.6 1.4 0.3 0.7 -0.6 -0.4
Select residue pair below:
i_j Score Prob
0084_0092 1.972 0.97
0081_0091 1.934 0.97
0070_0117 1.926 0.97
0058_0072 1.869 0.96
0084_0087 1.829 0.95
0065_0077 1.776 0.94
0081_0094 1.764 0.94
0081_0092 1.726 0.93
0088_0092 1.719 0.93
0008_0012 1.622 0.90
0087_0092 1.616 0.90
0064_0105 1.538 0.86
0028_0031 1.526 0.86
0073_0107 1.523 0.85
0006_0107 1.515 0.85
0091_0095 1.500 0.84
0081_0119 1.459 0.82
0100_0103 1.440 0.81
0051_0076 1.398 0.78
0020_0044 1.379 0.77
0044_0049 1.353 0.75
0029_0123 1.325 0.73
0084_0088 1.324 0.72
0038_0084 1.312 0.71
0070_0110 1.305 0.71
0002_0062 1.295 0.70
0115_0118 1.276 0.68
0050_0053 1.268 0.68
0063_0106 1.267 0.68
0038_0091 1.236 0.65
0005_0115 1.232 0.64
0008_0089 1.222 0.64
0061_0105 1.212 0.63
0097_0105 1.196 0.61
0028_0103 1.179 0.59
0003_0060 1.169 0.58
0031_0123 1.155 0.57
0005_0018 1.142 0.56
0007_0012 1.128 0.54
0012_0089 1.124 0.54
0066_0107 1.110 0.53
0019_0033 1.109 0.52
0117_0123 1.090 0.51
0038_0085 1.080 0.50
0031_0034 1.074 0.49
0091_0119 1.061 0.48
0081_0123 1.053 0.47
0074_0117 1.051 0.47
0001_0069 1.049 0.46
0093_0097 1.048 0.46
0051_0083 1.047 0.46
0014_0079 1.043 0.46
0094_0118 1.040 0.46
0046_0093 1.033 0.45
0041_0122 1.032 0.45
0100_0110 1.032 0.45
0050_0080 1.018 0.43
0009_0086 1.017 0.43
0054_0057 1.014 0.43
0015_0023 1.011 0.43
0092_0095 1.009 0.42
0021_0110 0.982 0.40
0006_0066 0.973 0.39
0048_0053 0.969 0.39
0051_0071 0.969 0.39
0050_0108 0.968 0.38
0040_0050 0.965 0.38
0013_0045 0.961 0.38
0062_0070 0.960 0.38
0035_0053 0.957 0.37
0088_0091 0.956 0.37
0043_0113 0.952 0.37
0010_0020 0.951 0.37
0075_0122 0.950 0.37
0007_0092 0.948 0.37
0019_0040 0.947 0.36
0011_0048 0.938 0.36
0041_0087 0.936 0.35
0109_0114 0.930 0.35
0001_0012 0.927 0.35
0091_0123 0.925 0.34
0026_0029 0.925 0.34
0052_0109 0.924 0.34
0061_0069 0.918 0.34
0048_0112 0.916 0.34
0042_0070 0.913 0.33
0051_0096 0.911 0.33
0069_0107 0.908 0.33
0049_0080 0.906 0.33
0080_0112 0.906 0.33
0095_0103 0.903 0.32
0041_0088 0.899 0.32
0012_0086 0.898 0.32
0092_0123 0.896 0.32
0007_0087 0.896 0.32
0032_0082 0.896 0.32
0069_0105 0.893 0.32
0025_0031 0.888 0.31
0056_0066 0.880 0.30
0015_0074 0.879 0.30
0097_0112 0.878 0.30
0041_0092 0.876 0.30
0007_0041 0.874 0.30
0049_0067 0.869 0.30
0057_0119 0.868 0.29
0080_0099 0.866 0.29
0100_0104 0.865 0.29
0081_0087 0.865 0.29
0010_0073 0.858 0.29
0052_0114 0.855 0.28
0051_0074 0.855 0.28
0045_0059 0.854 0.28
0061_0101 0.854 0.28
0001_0061 0.854 0.28
0080_0101 0.853 0.28
0009_0101 0.853 0.28
0060_0104 0.851 0.28
0042_0096 0.848 0.28
0039_0048 0.847 0.28
0032_0051 0.845 0.28
0047_0083 0.844 0.27
0002_0122 0.844 0.27
0039_0047 0.843 0.27
0079_0083 0.843 0.27
0005_0024 0.842 0.27
0043_0103 0.839 0.27
0031_0081 0.836 0.27
0017_0108 0.835 0.27
0099_0112 0.827 0.26
0032_0037 0.827 0.26
0024_0051 0.826 0.26
0087_0123 0.825 0.26
0010_0022 0.822 0.26
0018_0105 0.822 0.26
0024_0084 0.819 0.26
0041_0084 0.818 0.25
0017_0122 0.817 0.25
0006_0087 0.816 0.25
0060_0064 0.815 0.25
0013_0078 0.813 0.25
0064_0077 0.811 0.25
0038_0092 0.810 0.25
0075_0082 0.809 0.25
0023_0122 0.808 0.25
0075_0083 0.800 0.24
0043_0114 0.800 0.24
0061_0064 0.799 0.24
0087_0091 0.796 0.24
0052_0098 0.795 0.24
0066_0109 0.793 0.24
0005_0100 0.792 0.24
0070_0091 0.791 0.23
0044_0077 0.790 0.23
0042_0074 0.788 0.23
0055_0097 0.784 0.23
0010_0056 0.782 0.23
0054_0058 0.780 0.23
0023_0108 0.777 0.22
0117_0121 0.776 0.22
0004_0029 0.776 0.22
0009_0012 0.774 0.22
0097_0101 0.774 0.22
0085_0109 0.772 0.22
0037_0080 0.768 0.22
0055_0104 0.766 0.22
0040_0095 0.764 0.22
0056_0117 0.763 0.21
0033_0045 0.761 0.21
0059_0080 0.760 0.21
0013_0024 0.759 0.21
0007_0021 0.757 0.21
0030_0046 0.756 0.21
0023_0116 0.755 0.21
0005_0099 0.755 0.21
0087_0095 0.753 0.21
0030_0044 0.753 0.21
0085_0111 0.747 0.20
0076_0096 0.744 0.20
0077_0083 0.743 0.20
0017_0030 0.742 0.20
0087_0102 0.742 0.20
0086_0089 0.740 0.20
0011_0094 0.740 0.20
Local Interactions:
i_j Score Prob
0091_0092 2.482 1.00
0011_0013 1.892 0.96
0016_0018 1.651 0.91
0120_0121 1.416 0.79
0102_0103 1.317 0.72
0121_0123 1.282 0.69
0007_0008 1.275 0.68
0002_0003 1.230 0.64
0003_0004 1.211 0.62
0026_0028 1.131 0.55
0087_0088 1.078 0.49
0060_0062 1.018 0.43
0111_0112 1.015 0.43
0031_0033 1.010 0.43
0118_0119 1.007 0.42
0033_0034 0.917 0.34
0028_0030 0.889 0.31
0082_0084 0.888 0.31
0063_0064 0.884 0.31
0004_0005 0.880 0.30
0072_0074 0.858 0.29
0020_0021 0.857 0.29
0082_0083 0.856 0.28
0070_0071 0.847 0.28
0024_0026 0.815 0.25
0026_0027 0.795 0.24
0078_0079 0.784 0.23
0064_0066 0.760 0.21
0025_0027 0.760 0.21
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: F K N T F ...

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