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OPENSEQ.org
SDH Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0034 0.5 -1 -0.2 0.3 -0.5 -0.3 -1.2 -0.3 0 1.4 1.2 1.3 -0.1 0.3 1 0.4 0.2 -0.6 -0.8 -0.6
Select residue pair below:
i_j Score Prob
0030_0034 2.395 1.00
0034_0059 1.749 1.00
0031_0034 1.372 0.99
0034_0038 1.134 0.97
0034_0060 0.812 0.77
0034_0234 0.703 0.61
Local Interactions:
i_j Score Prob
0034_0035 0.563 0.38
0033_0034 0.534 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G S T S ...
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