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VH-biotin Return to Main Page
Instructions
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Coupling matrix for [Y:0109] and [V:0116]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.1 0.2 0.2 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0.2 0.1 0 0.1 -0.1
F 0.3 -0.1 0 -0.2 -0.5 -0.2 0 0 0 -0.1 -0.1 0.1 -0.1 0 0.4 0.1 0.4 0.1 0.2 -0.1
I -0.2 -0.2 -0.3 0.1 0.1 -0.2 0.3 0 0 -0.1 0.1 0.2 -0.1 -0.1 0.3 0.4 -0.1 -0.1 0 0.1
L -0.2 0.1 0.8 0.3 0 0.3 -0.1 -0.1 0 -0.1 -0.1 -0.2 -0.2 0 0 0.2 -0.2 -0.2 0 -0.1
V -0.1 -0.1 -0.5 0.5 0.6 -0.2 0 0 0.2 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 0.1 -0.2 -0.1 0.1 0
M -0.1 0.1 0.4 0.3 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 0
W 0 0 -0.1 -0.5 -0.1 0.2 0 0 0 0.3 0 0 0 0 -0.1 0 0.4 0 0 0
Y 0.3 -0.1 0.2 0.1 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0
D -0.1 0 0.2 -0.3 0.2 -0.1 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0.3 0.1 0
E -0.1 -0.1 0.7 -0.1 -0.2 0 0 0 0 -0.1 0 0.2 0 -0.1 -0.1 -0.1 0.2 0 -0.1 0
K -0.1 0.1 -0.3 0.4 0 0.4 0 0 0 -0.1 0 0 0 -0.1 -0.1 0 -0.1 0 -0.1 0
R -0.1 0.2 0 0.3 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 0 -0.3 0 -0.1 0
H 0 0.2 -0.2 -0.1 0.1 -0.2 0 0 0 0.4 0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0.2
N 0.2 -0.1 0.3 0 0.2 -0.1 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0
Q 0.2 -0.1 -0.1 0 0.3 0.1 0 0 0 -0.1 0 -0.1 0 0.2 -0.1 -0.1 -0.1 -0.1 0.1 0
S 0 0.1 0.1 0.3 0 -0.1 0 0 0 0 0 0.2 0 0 -0.1 -0.1 0 0.2 -0.1 0
T 0.1 0.1 -0.4 0.3 0.2 -0.2 -0.1 0 0 0.3 0.5 0 0.2 0.1 -0.1 -0.2 -0.3 -0.1 0.2 -0.1
G -0.1 0.2 -0.3 -0.1 -0.3 0.2 0 0 0 -0.1 0 0 0 0 0.1 0 0.5 0 -0.1 0
P -0.1 0 -0.2 -0.3 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.1 0.2 0.2 0
C 0.2 -0.1 -0.2 -0.7 0 0.2 0 0 0 0 0 -0.1 0 0.3 0.2 0 0.1 0.1 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0109 0.4 0.1 0.2 0.3 -0.2 -0.4 -0.7 -0.9 0.5 0.2 -0.1 0 -0.1 0.1 0.6 0.3 0.5 0.2 -0.3 0.1
0116 0 0 0.6 1 0.5 0.3 -0.5 -0.7 -0.5 -0.1 -0.2 0 -0.5 -0.2 0.3 0.3 0.1 -0.3 0.3 -0.3
Select residue pair below:
i_j Score Prob
0012_0086 2.728 1.00
0111_0114 2.484 1.00
0013_0016 2.296 1.00
0062_0065 2.164 1.00
0012_0016 2.056 1.00
0038_0092 1.944 1.00
0068_0083 1.905 1.00
0039_0045 1.776 1.00
0048_0068 1.750 1.00
0110_0113 1.729 1.00
0113_0116 1.692 1.00
0049_0070 1.681 1.00
0037_0047 1.653 1.00
0036_0081 1.571 1.00
0019_0080 1.553 1.00
0106_0109 1.524 1.00
0024_0034 1.518 1.00
0048_0064 1.497 1.00
0114_0118 1.496 1.00
0034_0079 1.486 1.00
0012_0018 1.476 1.00
0090_0094 1.459 1.00
0038_0046 1.424 1.00
0110_0114 1.414 1.00
0110_0115 1.403 0.99
0035_0047 1.401 0.99
0033_0050 1.394 0.99
0107_0110 1.381 0.99
0019_0082 1.364 0.99
0110_0116 1.325 0.99
0108_0117 1.317 0.99
0108_0115 1.302 0.99
0010_0018 1.298 0.99
0035_0097 1.291 0.99
0109_0112 1.262 0.99
0106_0110 1.256 0.99
0112_0117 1.247 0.99
0108_0112 1.242 0.98
0073_0076 1.234 0.98
0094_0097 1.226 0.98
0115_0118 1.216 0.98
0113_0118 1.211 0.98
0111_0115 1.195 0.98
0054_0057 1.195 0.98
0107_0115 1.186 0.98
0061_0064 1.156 0.97
0106_0112 1.147 0.97
0033_0052 1.146 0.97
0067_0090 1.140 0.97
0050_0059 1.106 0.96
0111_0116 1.091 0.96
0051_0079 1.084 0.96
0115_0119 1.074 0.95
0018_0116 1.060 0.95
0109_0117 1.059 0.95
0060_0064 1.057 0.95
0047_0061 1.055 0.95
0053_0056 1.051 0.94
0023_0078 1.047 0.94
0100_0103 1.047 0.94
0110_0119 1.047 0.94
0043_0046 1.046 0.94
0069_0082 1.043 0.94
0067_0083 1.042 0.94
0017_0082 1.034 0.94
0112_0115 1.032 0.94
0060_0066 1.027 0.94
0024_0029 1.020 0.93
0109_0115 1.009 0.93
0106_0115 0.976 0.91
0107_0112 0.970 0.91
0107_0117 0.968 0.91
0015_0022 0.957 0.90
0107_0116 0.947 0.89
0108_0113 0.945 0.89
0073_0077 0.945 0.89
0092_0096 0.924 0.88
0035_0050 0.923 0.88
0083_0090 0.920 0.87
0053_0057 0.902 0.86
0037_0045 0.890 0.85
0060_0063 0.878 0.84
0044_0047 0.870 0.83
0112_0116 0.865 0.83
0061_0078 0.864 0.83
0051_0059 0.860 0.82
0029_0034 0.858 0.82
0083_0093 0.856 0.82
0099_0103 0.851 0.81
0103_0106 0.851 0.81
0006_0009 0.848 0.81
0108_0116 0.844 0.81
0108_0119 0.833 0.79
0042_0045 0.831 0.79
0017_0084 0.830 0.79
0005_0008 0.823 0.78
0112_0119 0.818 0.78
0056_0074 0.814 0.77
0093_0097 0.814 0.77
0051_0072 0.812 0.77
0038_0090 0.812 0.77
0005_0010 0.811 0.77
0006_0010 0.807 0.76
0066_0085 0.806 0.76
0074_0077 0.782 0.73
0034_0098 0.782 0.73
0065_0068 0.779 0.73
0109_0119 0.777 0.72
0040_0043 0.775 0.72
0083_0087 0.774 0.72
0051_0070 0.772 0.72
0099_0102 0.771 0.71
0109_0116 0.769 0.71
0035_0099 0.769 0.71
0116_0119 0.765 0.71
0016_0080 0.764 0.71
0005_0009 0.764 0.71
0015_0019 0.763 0.70
0110_0118 0.755 0.69
0114_0119 0.750 0.68
0109_0118 0.748 0.68
0055_0058 0.744 0.68
0021_0078 0.743 0.67
0071_0080 0.742 0.67
0024_0077 0.740 0.67
0033_0051 0.739 0.67
0108_0111 0.737 0.67
0010_0013 0.733 0.66
0079_0091 0.732 0.66
0046_0063 0.731 0.66
0090_0096 0.731 0.66
0036_0096 0.729 0.65
0067_0085 0.726 0.65
0109_0114 0.718 0.64
0114_0117 0.714 0.63
0080_0084 0.705 0.61
0039_0042 0.699 0.60
0106_0113 0.698 0.60
0014_0088 0.694 0.60
0093_0096 0.694 0.60
0064_0068 0.690 0.59
0111_0118 0.689 0.59
0107_0119 0.686 0.58
0108_0114 0.686 0.58
0023_0026 0.679 0.57
0109_0113 0.678 0.57
0106_0111 0.676 0.57
0081_0094 0.674 0.56
0006_0114 0.673 0.56
0106_0117 0.672 0.56
0026_0098 0.666 0.55
0030_0059 0.665 0.55
0063_0071 0.665 0.55
0101_0106 0.662 0.54
0082_0088 0.656 0.53
0069_0084 0.653 0.53
0016_0087 0.651 0.52
0013_0092 0.650 0.52
0060_0065 0.649 0.52
0059_0065 0.643 0.51
0046_0049 0.643 0.51
0063_0070 0.642 0.51
0037_0097 0.641 0.51
0003_0023 0.639 0.50
0025_0032 0.636 0.50
0012_0019 0.635 0.50
0031_0057 0.634 0.49
0034_0081 0.631 0.49
0072_0079 0.627 0.48
0017_0086 0.626 0.48
0064_0070 0.625 0.48
0091_0098 0.624 0.48
0101_0109 0.622 0.47
0023_0080 0.620 0.47
0068_0071 0.617 0.47
Local Interactions:
i_j Score Prob
0101_0102 3.544 1.00
0004_0006 3.387 1.00
0094_0096 3.235 1.00
0100_0101 3.231 1.00
0007_0008 2.711 1.00
0102_0103 2.573 1.00
0099_0100 2.437 1.00
0005_0006 2.426 1.00
0111_0113 2.342 1.00
0094_0095 2.327 1.00
0028_0029 2.315 1.00
0116_0118 2.211 1.00
0087_0089 2.182 1.00
0108_0110 2.077 1.00
0001_0002 2.062 1.00
0106_0107 1.968 1.00
0108_0109 1.962 1.00
0063_0064 1.952 1.00
0113_0114 1.946 1.00
0099_0101 1.941 1.00
0060_0061 1.920 1.00
0002_0003 1.871 1.00
0115_0117 1.848 1.00
0092_0094 1.819 1.00
0107_0108 1.819 1.00
0062_0063 1.800 1.00
0056_0057 1.794 1.00
0107_0109 1.780 1.00
0095_0096 1.767 1.00
0100_0102 1.755 1.00
0114_0116 1.753 1.00
0110_0111 1.746 1.00
0003_0005 1.728 1.00
0006_0008 1.721 1.00
0004_0005 1.695 1.00
0001_0003 1.659 1.00
0009_0010 1.647 1.00
0084_0085 1.628 1.00
0056_0058 1.579 1.00
0026_0027 1.563 1.00
0057_0058 1.554 1.00
0061_0062 1.554 1.00
0050_0052 1.539 1.00
0011_0012 1.504 1.00
0008_0009 1.459 1.00
0007_0009 1.459 1.00
0117_0119 1.428 1.00
0057_0059 1.427 1.00
0097_0098 1.426 1.00
0006_0007 1.426 1.00
0117_0118 1.425 1.00
0114_0115 1.406 0.99
0064_0065 1.391 0.99
0112_0113 1.356 0.99
0044_0045 1.337 0.99
0109_0110 1.326 0.99
0115_0116 1.310 0.99
0058_0059 1.309 0.99
0110_0112 1.305 0.99
0082_0084 1.303 0.99
0085_0086 1.287 0.99
0003_0004 1.275 0.99
0106_0108 1.259 0.99
0058_0060 1.251 0.99
0028_0030 1.249 0.99
0076_0078 1.229 0.98
0096_0097 1.224 0.98
0112_0114 1.211 0.98
0070_0072 1.204 0.98
0031_0032 1.178 0.98
0043_0044 1.176 0.98
0088_0089 1.163 0.97
0018_0019 1.163 0.97
0118_0119 1.161 0.97
0089_0090 1.155 0.97
0087_0088 1.142 0.97
0074_0075 1.137 0.97
0092_0093 1.114 0.96
0080_0082 1.113 0.96
0055_0057 1.113 0.96
0071_0073 1.113 0.96
0101_0103 1.112 0.96
0041_0042 1.102 0.96
0073_0074 1.093 0.96
0045_0047 1.080 0.95
0111_0112 1.078 0.95
0090_0091 1.076 0.95
0078_0080 1.068 0.95
0052_0053 1.060 0.95
0010_0012 1.053 0.95
0025_0026 1.053 0.95
0061_0063 1.047 0.94
0098_0099 1.043 0.94
0024_0025 1.042 0.94
0053_0054 1.036 0.94
0072_0074 1.031 0.94
0093_0095 1.030 0.94
0081_0083 1.028 0.94
0033_0035 0.990 0.92
0116_0117 0.989 0.92
0054_0056 0.985 0.92
0036_0037 0.978 0.91
0109_0111 0.974 0.91
0027_0028 0.970 0.91
0052_0054 0.967 0.91
0069_0070 0.967 0.91
0059_0061 0.964 0.90
0091_0092 0.961 0.90
0053_0055 0.953 0.90
0074_0076 0.951 0.90
0060_0062 0.950 0.90
0078_0079 0.949 0.89
0038_0040 0.944 0.89
0083_0084 0.933 0.88
0066_0067 0.920 0.87
0054_0055 0.920 0.87
0012_0013 0.916 0.87
0035_0037 0.911 0.87
0021_0023 0.910 0.87
0067_0068 0.910 0.87
0077_0079 0.908 0.87
0098_0100 0.884 0.84
0049_0051 0.875 0.84
0046_0048 0.872 0.83
0047_0049 0.869 0.83
0079_0080 0.863 0.83
0012_0014 0.860 0.82
0010_0011 0.859 0.82
0085_0087 0.859 0.82
0008_0010 0.854 0.82
0059_0060 0.853 0.81
0063_0065 0.852 0.81
0090_0092 0.851 0.81
0045_0046 0.835 0.80
0065_0066 0.826 0.79
0048_0049 0.824 0.78
0046_0047 0.814 0.77
0073_0075 0.806 0.76
0002_0004 0.805 0.76
0097_0099 0.796 0.75
0064_0066 0.794 0.75
0070_0071 0.793 0.74
0044_0046 0.789 0.74
0037_0038 0.787 0.74
0040_0041 0.737 0.67
0113_0115 0.710 0.62
0051_0052 0.695 0.60
0029_0030 0.686 0.58
0075_0077 0.685 0.58
0096_0098 0.681 0.57
0065_0067 0.681 0.57
0040_0042 0.680 0.57
0089_0091 0.676 0.57
0042_0044 0.662 0.54
0016_0017 0.658 0.54
0076_0077 0.640 0.50
0069_0071 0.639 0.50
0024_0026 0.637 0.50
0049_0050 0.626 0.48
0026_0028 0.617 0.47
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: Q V Q L V ...
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