May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
Precursor-HVR-1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [T:0050] and [H:0058]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.2 0.4 0.1 -0.2 -0.1 -0.2 0.5 -0.1 0.2 -0.1 -0.3 0 0.6 0.1 -0.3 -0.1 -0.1 -0.1
F 0 0 0 0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0
I -0.1 0 0 0.1 0 0 0 0 0 -0.1 0.3 -0.2 0.2 -0.1 -0.1 0 -0.1 0.3 0 0
L 0.1 -0.1 -0.1 0 0.6 -0.1 0 -0.1 -0.1 -0.2 -0.1 0.1 0.4 -0.1 -0.2 -0.1 0.2 -0.1 0 0
V -0.1 0 0 -0.2 0 0 0 0 0 0 0 -0.1 -0.1 0 0.4 0 0 0 0 0
M 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0.3 -0.1 0.3 -0.1 -0.1 0 0 0 0 0
Y 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 0 -0.1 0 0 0 0 0 0 0 0.2 -0.1 0 -0.1 0 0 0 0 0
E 0 0.2 0.2 0.2 -0.1 0.2 0 -0.1 -0.1 -0.3 -0.1 0.3 -0.3 0.2 0 -0.1 0.5 -0.1 -0.1 0
K -0.2 0 -0.1 -0.3 0 0.8 0 -0.1 0 -0.1 -0.1 0.3 0.1 0.3 -0.2 -0.1 -0.1 -0.2 0 0
R 0.7 -0.2 -0.3 -1 0.5 0.3 -0.1 -0.4 0.2 0.2 -0.4 0.4 0.9 -0.1 0.6 -0.4 -0.4 0.5 -0.3 -0.1
H -0.1 0 -0.1 0.3 0 0 0 0 0 -0.1 0.3 0.2 -0.1 0 -0.1 0 -0.1 -0.1 0 0
N -0.1 0 0 0.2 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 0 0 0 0 0
Q -0.1 0.3 -0.1 0.7 -0.1 -0.2 0 0.8 -0.1 -0.2 0.2 -0.5 -0.2 0.2 -0.4 0.7 -0.2 -0.2 -0.1 0
S -0.4 -0.1 0.1 -0.1 -0.2 -0.2 0.2 -0.1 -0.2 -0.3 0.4 0.7 0 0.4 0 0.1 0 0.1 0.3 0
T -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.1 -0.1 -0.2 -0.1 0.3 0.2 0.3 0.5 -0.1 -0.1 0 0.2 0
G 0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 0.1 -0.2 1.8 -0.2 -0.4 -0.1 -0.2 -0.2 0.1 0.2 0.5 -0.1 -0.1
P 0.4 0 0.2 1 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
C -0.1 0 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0.4 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0050 1.1 -0.7 -0.2 0.4 -0.7 -0.8 -0.4 -0.8 -0.6 0.5 0.1 1.2 -0.3 -0.7 0.5 0.9 0.2 0.8 0.1 -0.6
0058 0.7 -0.4 -0.4 1.4 -0.4 -0.3 -1.1 -0.1 -0.2 0.4 0.1 1.2 1 -0.1 0.4 -0.2 -0.1 0.1 -0.6 -1.1
Select residue pair below:
i_j Score Prob
0013_0016 4.146 1.00
0022_0028 2.435 1.00
0021_0027 2.018 1.00
0034_0038 1.900 1.00
0013_0022 1.814 1.00
0037_0044 1.734 1.00
0039_0042 1.725 1.00
0024_0028 1.696 1.00
0013_0024 1.695 1.00
0020_0026 1.670 0.99
0013_0028 1.606 0.99
0037_0041 1.544 0.99
0023_0028 1.522 0.99
0061_0064 1.423 0.98
0037_0040 1.415 0.98
0025_0039 1.414 0.98
0120_0123 1.400 0.97
0004_0007 1.365 0.97
0037_0046 1.361 0.97
0001_0005 1.337 0.96
0126_0131 1.327 0.96
0038_0044 1.323 0.96
0022_0027 1.311 0.96
0134_0138 1.303 0.96
0037_0043 1.290 0.95
0041_0045 1.285 0.95
0029_0038 1.252 0.94
0002_0005 1.246 0.94
0021_0024 1.244 0.94
0010_0016 1.225 0.93
0001_0004 1.222 0.93
0036_0044 1.215 0.93
0040_0044 1.209 0.93
0120_0124 1.204 0.93
0035_0038 1.191 0.92
0003_0006 1.157 0.90
0001_0006 1.146 0.90
0005_0008 1.145 0.90
0031_0036 1.138 0.90
0030_0037 1.137 0.89
0130_0134 1.134 0.89
0047_0052 1.126 0.89
0134_0137 1.112 0.88
0031_0040 1.110 0.88
0003_0007 1.109 0.88
0013_0023 1.109 0.88
0112_0131 1.109 0.88
0041_0044 1.089 0.87
0038_0041 1.080 0.86
0024_0029 1.080 0.86
0076_0105 1.077 0.86
0007_0010 1.071 0.85
0018_0028 1.048 0.84
0004_0008 1.046 0.83
0068_0076 1.045 0.83
0037_0045 1.044 0.83
0031_0044 1.041 0.83
0023_0026 1.034 0.82
0040_0043 1.023 0.82
0083_0088 1.020 0.81
0010_0013 1.017 0.81
0057_0061 1.014 0.81
0039_0043 1.009 0.80
0135_0138 1.007 0.80
0034_0037 1.006 0.80
0054_0058 1.005 0.80
0032_0035 0.997 0.79
0015_0020 0.994 0.79
0019_0026 0.990 0.79
0023_0027 0.985 0.78
0029_0034 0.984 0.78
0031_0039 0.982 0.78
0052_0055 0.981 0.78
0055_0060 0.981 0.78
0077_0092 0.970 0.77
0128_0139 0.968 0.76
0071_0075 0.964 0.76
0055_0061 0.962 0.76
0041_0046 0.960 0.75
0055_0058 0.960 0.75
0013_0017 0.958 0.75
0059_0073 0.958 0.75
0040_0045 0.957 0.75
0030_0042 0.952 0.75
0050_0058 0.952 0.75
0002_0006 0.951 0.74
0012_0015 0.949 0.74
0133_0141 0.949 0.74
0036_0041 0.946 0.74
0025_0040 0.943 0.74
0016_0019 0.941 0.73
0019_0023 0.941 0.73
0038_0046 0.941 0.73
0005_0009 0.936 0.73
0088_0136 0.928 0.72
0061_0066 0.926 0.72
0126_0130 0.923 0.71
0017_0020 0.923 0.71
0002_0007 0.922 0.71
0102_0106 0.915 0.70
0031_0041 0.912 0.70
0091_0111 0.910 0.70
0020_0043 0.906 0.69
0107_0110 0.904 0.69
0049_0052 0.900 0.69
0018_0070 0.899 0.68
0037_0042 0.898 0.68
0039_0044 0.897 0.68
0013_0018 0.896 0.68
0125_0128 0.893 0.68
0068_0105 0.893 0.68
0019_0029 0.893 0.68
0066_0073 0.888 0.67
0020_0023 0.887 0.67
0036_0039 0.886 0.67
0047_0067 0.885 0.67
0116_0123 0.884 0.67
0109_0122 0.884 0.67
0019_0022 0.879 0.66
0129_0133 0.879 0.66
0133_0137 0.878 0.66
0039_0045 0.874 0.65
0066_0070 0.869 0.65
0031_0042 0.869 0.65
0035_0045 0.866 0.64
0133_0138 0.866 0.64
0126_0136 0.865 0.64
0011_0027 0.865 0.64
0016_0024 0.864 0.64
0047_0057 0.864 0.64
0032_0041 0.860 0.63
0083_0087 0.859 0.63
0118_0122 0.858 0.63
0029_0046 0.858 0.63
0137_0141 0.858 0.63
0036_0046 0.857 0.63
0050_0055 0.853 0.62
0128_0133 0.851 0.62
0030_0039 0.849 0.62
0005_0010 0.846 0.62
0004_0009 0.846 0.62
0027_0040 0.846 0.62
0018_0026 0.845 0.61
0017_0024 0.843 0.61
0056_0096 0.837 0.60
0016_0038 0.833 0.60
0012_0017 0.829 0.59
0115_0119 0.829 0.59
0084_0088 0.825 0.59
0012_0019 0.825 0.59
0034_0041 0.824 0.59
0020_0030 0.824 0.59
0138_0141 0.823 0.58
0139_0142 0.820 0.58
0030_0043 0.819 0.58
0048_0052 0.819 0.58
0024_0027 0.818 0.58
0057_0062 0.818 0.58
0025_0044 0.815 0.57
0019_0027 0.814 0.57
0005_0018 0.809 0.56
0014_0037 0.807 0.56
0074_0091 0.806 0.56
0032_0045 0.806 0.56
0043_0046 0.805 0.56
0035_0040 0.804 0.56
0128_0134 0.802 0.55
0136_0141 0.800 0.55
0003_0008 0.799 0.55
0109_0120 0.797 0.55
0033_0044 0.795 0.54
0026_0029 0.793 0.54
0085_0123 0.792 0.54
0131_0142 0.790 0.54
0034_0042 0.789 0.54
0131_0139 0.789 0.54
0085_0132 0.784 0.53
0076_0080 0.783 0.53
0115_0120 0.782 0.53
0017_0026 0.782 0.53
0051_0054 0.782 0.53
0001_0007 0.781 0.52
0098_0101 0.781 0.52
0036_0045 0.779 0.52
0069_0107 0.778 0.52
0127_0130 0.774 0.51
0047_0051 0.774 0.51
0038_0045 0.773 0.51
0127_0139 0.770 0.51
0056_0060 0.769 0.51
0025_0031 0.768 0.51
0012_0016 0.766 0.50
0029_0036 0.765 0.50
0013_0026 0.764 0.50
0112_0115 0.763 0.50
0021_0065 0.763 0.50
0042_0045 0.761 0.50
0032_0042 0.759 0.49
0078_0083 0.757 0.49
0094_0117 0.755 0.49
0074_0098 0.755 0.49
0127_0131 0.753 0.48
0105_0109 0.753 0.48
0058_0066 0.750 0.48
0134_0142 0.747 0.48
0055_0073 0.744 0.47
0018_0023 0.743 0.47
0029_0044 0.741 0.47
0011_0029 0.741 0.47
0035_0041 0.739 0.46
0132_0139 0.738 0.46
Local Interactions:
i_j Score Prob
0037_0038 3.420 1.00
0029_0030 2.375 1.00
0010_0011 2.264 1.00
0028_0030 2.107 1.00
0127_0129 2.002 1.00
0023_0024 1.935 1.00
0015_0016 1.768 1.00
0137_0138 1.766 1.00
0007_0008 1.704 1.00
0013_0015 1.695 1.00
0013_0014 1.601 0.99
0034_0035 1.595 0.99
0001_0002 1.593 0.99
0039_0041 1.544 0.99
0014_0016 1.503 0.99
0004_0005 1.498 0.99
0003_0004 1.465 0.98
0140_0141 1.446 0.98
0006_0007 1.439 0.98
0066_0067 1.429 0.98
0039_0040 1.427 0.98
0023_0025 1.418 0.98
0002_0003 1.386 0.97
0008_0009 1.383 0.97
0009_0010 1.379 0.97
0005_0006 1.376 0.97
0072_0074 1.372 0.97
0022_0024 1.348 0.97
0043_0044 1.335 0.96
0028_0029 1.331 0.96
0125_0126 1.326 0.96
0069_0070 1.325 0.96
0009_0011 1.310 0.96
0002_0004 1.304 0.96
0133_0135 1.293 0.95
0054_0055 1.287 0.95
0047_0048 1.283 0.95
0001_0003 1.274 0.95
0044_0045 1.247 0.94
0134_0135 1.245 0.94
0133_0134 1.238 0.94
0050_0051 1.230 0.94
0032_0034 1.226 0.93
0020_0021 1.219 0.93
0008_0010 1.216 0.93
0007_0009 1.206 0.93
0139_0140 1.201 0.92
0016_0018 1.195 0.92
0102_0103 1.191 0.92
0038_0040 1.171 0.91
0004_0006 1.166 0.91
0016_0017 1.161 0.91
0055_0057 1.159 0.91
0022_0023 1.153 0.90
0127_0128 1.152 0.90
0098_0100 1.151 0.90
0040_0041 1.143 0.90
0027_0028 1.135 0.89
0056_0057 1.132 0.89
0019_0021 1.128 0.89
0128_0129 1.124 0.89
0033_0035 1.114 0.88
0081_0082 1.113 0.88
0045_0046 1.099 0.87
0094_0095 1.098 0.87
0014_0015 1.083 0.86
0031_0032 1.077 0.86
0052_0053 1.077 0.86
0118_0120 1.068 0.85
0005_0007 1.062 0.85
0141_0142 1.057 0.84
0120_0122 1.051 0.84
0019_0020 1.041 0.83
0129_0130 1.040 0.83
0112_0114 1.038 0.83
0003_0005 1.034 0.82
0117_0118 1.032 0.82
0041_0042 1.030 0.82
0041_0043 1.008 0.80
0138_0140 1.003 0.80
0050_0052 0.989 0.78
0064_0066 0.981 0.78
0053_0054 0.978 0.77
0027_0029 0.977 0.77
0011_0012 0.975 0.77
0051_0052 0.969 0.76
0048_0049 0.957 0.75
0032_0033 0.941 0.73
0124_0126 0.922 0.71
0021_0023 0.911 0.70
0051_0053 0.908 0.70
0064_0065 0.905 0.69
0083_0084 0.892 0.68
0006_0008 0.880 0.66
0132_0134 0.870 0.65
0060_0061 0.868 0.64
0092_0094 0.862 0.64
0033_0034 0.859 0.63
0042_0043 0.852 0.62
0036_0037 0.849 0.62
0100_0101 0.846 0.62
0086_0088 0.843 0.61
0044_0046 0.842 0.61
0037_0039 0.841 0.61
0048_0050 0.840 0.61
0080_0081 0.831 0.60
0036_0038 0.829 0.59
0065_0066 0.826 0.59
0052_0054 0.823 0.58
0095_0096 0.820 0.58
0025_0027 0.816 0.57
0079_0081 0.815 0.57
0049_0050 0.810 0.57
0042_0044 0.801 0.55
0059_0060 0.789 0.54
0047_0049 0.787 0.53
0054_0056 0.756 0.49
0031_0033 0.748 0.48
0123_0124 0.747 0.48
0026_0028 0.746 0.47
0068_0070 0.742 0.47
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D E E K ...
Page generated in 0.0173 seconds.