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OPENSEQ.org

LAT1 sequence restraints Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0480 0.6 -0.3 0 0.3 0.2 -0.8 -0.4 -0.2 0 -0.3 1.5 1.2 -0.2 -0.2 -0.1 0.1 -0.1 0.2 -0.1 -1
Select residue pair below:
i_j Score Prob
0476_0480 0.848 0.81
0477_0480 0.793 0.74
0480_0483 0.667 0.55
Local Interactions:
i_j Score Prob
0478_0480 0.950 0.90
0479_0480 0.882 0.84
0480_0481 0.854 0.82
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A G A G ...

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