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OPENSEQ.org
channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0239 1 1.7 1.2 1.8 1.5 0.9 0.3 0.7 -0.9 -0.9 -0.9 -0.9 -0.9 -0.9 -0.9 -0.7 -0.6 0 -0.9 -0.5
Select residue pair below:
i_j Score Prob
0194_0239 0.930 0.62
0186_0239 0.918 0.61
0239_0243 0.913 0.60
0235_0239 0.795 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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