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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0233 -0.1 0.3 0.2 0.3 0.2 0.3 -0.3 -0.1 -0.3 -0.3 0 0.7 -0.3 -0.3 0.7 -0.2 0.2 -0.1 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0099_0233 2.521 1.00
0103_0233 1.683 0.99
0104_0233 1.611 0.98
0139_0233 1.234 0.89
0199_0233 1.220 0.88
0070_0233 1.203 0.87
0096_0233 0.867 0.54
0136_0233 0.838 0.50
0132_0233 0.773 0.42
0067_0233 0.713 0.35
Local Interactions:
i_j Score Prob
0232_0233 1.153 0.84
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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