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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0232 0.1 -0.1 0.8 1 0.4 0.5 -0.2 0 -0.5 -0.3 -0.5 -0.5 -0.5 -0.4 -0.3 0.7 0.9 0.1 -0.5 -0.3
Select residue pair below:
i_j Score Prob
0138_0232 1.494 0.97
0067_0232 0.964 0.66
0232_0236 0.959 0.66
0070_0232 0.955 0.65
0099_0232 0.955 0.65
0139_0232 0.790 0.44
0195_0232 0.772 0.42
0132_0232 0.746 0.39
0199_0232 0.731 0.37
Local Interactions:
i_j Score Prob
0232_0233 1.153 0.84
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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