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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0230 0.2 1.1 1.7 1.6 2 0 -0.6 -0.5 -0.6 -0.4 -0.6 -0.6 -0.6 -0.6 -0.6 -0.4 0.4 -0.4 -0.6 -0.1
Select residue pair below:
i_j Score Prob
0038_0230 2.155 1.00
0035_0230 0.950 0.65
0043_0230 0.938 0.63
0031_0230 0.812 0.47
0129_0230 0.810 0.47
0193_0230 0.790 0.44
0230_0242 0.746 0.39
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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