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OPENSEQ.org
channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0220 1.2 -0.1 0.5 0.4 1.1 -0.3 -0.5 -0.7 -0.1 -0.3 -0.7 -0.6 -1 0 0.1 1.2 0.8 0.9 -0.1 -0.8
Select residue pair below:
i_j Score Prob
0217_0220 1.123 0.82
0152_0220 1.015 0.72
0220_0224 0.939 0.63
0159_0220 0.832 0.50
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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