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OPENSEQ.org
channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0205 1.6 0.3 0.9 1.2 1.6 -0.8 0.1 0 -0.8 -0.7 -0.8 -0.8 -0.8 -0.4 -0.8 0.5 0 0.5 -0.8 0.8
Select residue pair below:
i_j Score Prob
0201_0205 1.568 0.98
0205_0224 1.324 0.93
0187_0205 0.920 0.61
0205_0234 0.726 0.36
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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