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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0203 0.8 0.3 0.5 0.9 0.5 -0.3 -0.3 -0.2 -0.3 -0.1 -0.3 -0.3 -0.3 0.1 -0.3 -0.3 -0.1 0.3 0.2 -0.3
Select residue pair below:
i_j Score Prob
0100_0203 1.122 0.82
0139_0203 0.880 0.56
0070_0203 0.860 0.53
0097_0203 0.809 0.47
0135_0203 0.808 0.46
0105_0203 0.721 0.36
Local Interactions:
i_j Score Prob
0202_0203 1.216 0.88
0203_0204 0.744 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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