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OPENSEQ.org
channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0187 0.6 0.4 0.6 1.6 0.6 -0.2 -0.7 -0.5 -0.2 -1 0.3 0 0.3 -0.4 -1 0.3 0.5 0.2 -0.2 -0.4
Select residue pair below:
i_j Score Prob
0187_0205 0.920 0.61
0187_0194 0.829 0.49
0187_0204 0.775 0.42
0187_0190 0.733 0.37
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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