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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0139 0.7 0.4 -0.1 0.5 0 0.1 0.1 0.1 -0.2 -0.1 -0.2 0 -0.2 -0.2 -0.1 0.4 0.5 -1 -0.2 -0.1
Select residue pair below:
i_j Score Prob
0135_0139 1.437 0.96
0139_0233 1.234 0.89
0136_0139 1.073 0.78
0104_0139 1.039 0.74
0039_0139 1.009 0.71
0139_0236 0.957 0.65
0108_0139 0.951 0.65
0096_0139 0.938 0.63
0100_0139 0.923 0.61
0139_0203 0.880 0.56
0139_0232 0.790 0.44
0067_0139 0.780 0.43
0103_0139 0.759 0.40
0139_0157 0.757 0.40
0070_0139 0.710 0.34
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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