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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0135 0.6 0.6 0.2 0.3 0.3 0.1 0.5 0 -0.4 -0.4 -0.4 0 -0.4 -0.4 0 0.2 0.3 -0.2 -0.4 -0.1
Select residue pair below:
i_j Score Prob
0135_0139 1.437 0.96
0132_0135 1.360 0.94
0104_0135 1.323 0.93
0070_0135 1.124 0.82
0135_0164 1.057 0.76
0135_0157 0.859 0.53
0135_0203 0.808 0.46
0103_0135 0.764 0.41
0096_0135 0.712 0.34
Local Interactions:
i_j Score Prob
0135_0136 0.775 0.42
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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