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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0132 0.5 -0.2 0.3 0.1 0.5 -0.2 -0.5 -0.2 -0.8 -0.1 -0.5 -0.5 0 -0.1 0.3 0.9 0.9 0.2 -0.1 -0.3
Select residue pair below:
i_j Score Prob
0104_0132 2.493 1.00
0132_0135 1.360 0.94
0103_0132 1.019 0.72
0108_0132 0.943 0.64
0132_0199 0.855 0.53
0097_0132 0.822 0.48
0132_0233 0.773 0.42
0132_0164 0.756 0.40
0132_0232 0.746 0.39
0073_0132 0.730 0.37
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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