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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0116 0.5 -0.4 -0.1 0 0 0.5 -0.8 -0.6 0.1 -0.1 0.5 0.8 -0.1 0.7 -0.5 0.4 -0.1 1.1 -0.4 -0.8
Select residue pair below:
i_j Score Prob
0116_0175 1.181 0.86
0116_0196 0.982 0.68
0116_0182 0.936 0.63
0116_0120 0.906 0.59
0116_0125 0.875 0.55
Local Interactions:
i_j Score Prob
0116_0117 0.933 0.63
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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