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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0103 1.4 -0.5 -0.1 -0.1 0.3 -0.1 -0.5 -0.5 0.1 -0.3 -0.5 -0.5 -0.5 0.2 -0.5 1.2 1.1 0.6 -0.5 0.2
Select residue pair below:
i_j Score Prob
0099_0103 2.323 1.00
0103_0233 1.683 0.99
0103_0106 1.473 0.97
0070_0103 1.443 0.96
0103_0132 1.019 0.72
0103_0110 0.843 0.51
0103_0135 0.764 0.41
0103_0139 0.759 0.40
Local Interactions:
i_j Score Prob
0103_0104 0.759 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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