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channelrhodopsin2 20-280 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0098 1 -0.2 1.5 1.7 2.1 0.4 -0.4 -0.4 -0.6 -0.6 -0.6 -0.6 -0.6 -0.4 -0.6 -0.2 -0.4 0 -0.4 -0.2
Select residue pair below:
i_j Score Prob
0094_0098 2.599 1.00
0098_0141 1.008 0.71
0041_0098 0.910 0.60
0098_0107 0.790 0.44
0098_0195 0.752 0.39
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...

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