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OPENSEQ.org
channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0096 -0.2 -0.5 -0.3 -0.5 -0.5 -0.5 0.2 -0.5 0.4 -0.5 1.7 2.9 0.5 -0.5 0 -0.2 -0.3 -0.3 0 -0.5
Select residue pair below:
i_j Score Prob
0096_0139 0.938 0.63
0077_0096 0.902 0.59
0096_0233 0.867 0.54
0096_0135 0.712 0.34
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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