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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0078 0.5 0.4 0 0.3 0 -0.2 0 0.2 -0.4 -0.4 0.1 -0.2 -0.2 -0.5 -0.2 0.8 0.7 0.4 -0.6 -0.6
Select residue pair below:
i_j Score Prob
0033_0078 1.923 1.00
0036_0078 0.847 0.52
0078_0082 0.826 0.49
0078_0226 0.752 0.39
0078_0153 0.738 0.38
Local Interactions:
i_j Score Prob
0078_0080 0.835 0.50
0078_0079 0.748 0.39
0076_0078 0.717 0.35
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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