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channelrhodopsin2 20-280 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0035 0.8 0.2 0.8 -0.1 0.8 -0.1 -0.2 -0.1 -0.6 -0.3 -0.6 -0.6 -0.6 -0.3 -0.6 0.2 0.6 0.6 -0.6 0.3
Select residue pair below:
i_j Score Prob
0035_0226 1.597 0.98
0031_0035 1.505 0.97
0035_0072 1.124 0.82
0035_0133 1.006 0.71
0035_0039 0.973 0.67
0035_0230 0.950 0.65
0035_0071 0.710 0.34
Local Interactions:
i_j Score Prob
0034_0035 0.789 0.44
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G S I V I ...
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