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t_coffee_200 -force run Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0182 0.2 0.2 0.2 0.2 -0.1 -0.2 -0.2 0.2 0.2 0.1 -0.2 0.1 0.3 0 0 -0.2 -0.2 -0.1 0 -0.2
Select residue pair below:
i_j Score Prob
0143_0182 1.563 0.60
0145_0182 1.457 0.52
0110_0182 1.307 0.41
0100_0182 1.164 0.31
0177_0182 1.055 0.24
0182_0270 1.035 0.23
0182_0372 0.920 0.17
0182_0376 0.893 0.16
0141_0182 0.833 0.14
0170_0182 0.817 0.13
Local Interactions:
i_j Score Prob
0181_0182 1.115 0.28
0180_0182 0.810 0.13
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S A P F ...
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