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t_coffee_200 -force run Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0097 0.2 -0.1 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -0.1 0.2 0 0.2 0.5 -0.1 0.3 0.1 0.1 0.1 -0.2 -0.1
Select residue pair below:
i_j Score Prob
0097_0148 2.049 0.87
0086_0097 2.008 0.86
0097_0121 1.104 0.27
0097_0180 0.898 0.16
0097_0154 0.897 0.16
0097_0149 0.882 0.16
0097_0160 0.880 0.16
0097_0212 0.816 0.13
Local Interactions:
i_j Score Prob
0097_0099 0.939 0.18
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S A P F ...

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