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OPENSEQ.org
HIV Vif Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0173 0.2 -0.1 -0.1 -0.2 -0.2 -0.2 -0.2 0 -0.2 -0.2 0.1 0.2 0 0 0.2 0.5 0.2 -0.1 0 -0.2
Select residue pair below:
i_j Score Prob
0163_0173 1.116 0.96
0170_0173 1.062 0.95
0048_0173 1.026 0.94
0164_0173 1.000 0.92
0049_0173 0.879 0.84
0169_0173 0.854 0.82
0166_0173 0.833 0.79
0125_0173 0.817 0.77
0162_0173 0.806 0.76
Local Interactions:
i_j Score Prob
0171_0173 1.918 1.00
0172_0173 1.719 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E N R W ...
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