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OPENSEQ.org
HIV Vif Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0166 0.1 -0.1 0.1 0.3 0.1 -0.2 0 -0.2 -0.2 -0.2 -0.2 0.3 -0.2 0 0 0.1 0.4 0.1 0.2 -0.2
Select residue pair below:
i_j Score Prob
0163_0166 1.017 0.93
0162_0166 0.858 0.82
0166_0170 0.845 0.81
0161_0166 0.834 0.79
0166_0173 0.833 0.79
0166_0169 0.825 0.78
Local Interactions:
i_j Score Prob
0165_0166 1.193 0.98
0166_0168 0.958 0.90
0166_0167 0.937 0.89
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E N R W ...
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