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OPENSEQ.org
HIV Vif Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0102 -0.1 -0.1 0.1 0.6 0.4 0.1 -0.1 0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.2 -0.1 -0.1 0.1
Select residue pair below:
i_j Score Prob
0102_0105 1.256 0.99
0099_0102 1.230 0.98
0102_0147 1.167 0.97
0102_0124 0.900 0.86
0102_0141 0.885 0.85
0102_0152 0.857 0.82
0102_0153 0.855 0.82
0102_0128 0.832 0.79
0102_0116 0.826 0.79
0102_0118 0.790 0.74
Local Interactions:
i_j Score Prob
0101_0102 1.308 0.99
0100_0102 0.934 0.88
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E N R W ...
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