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OPENSEQ.org

HIV Vif Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0098 -0.2 -0.2 1.3 1.3 1.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1
Select residue pair below:
i_j Score Prob
0064_0098 3.371 1.00
0091_0098 1.148 0.97
0098_0134 1.086 0.96
0098_0122 1.047 0.94
0098_0136 0.930 0.88
0062_0098 0.858 0.82
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E N R W ...

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