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OPENSEQ.org

HIV Vif Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0050 -0.2 0.3 -0.2 -0.2 -0.2 -0.2 0.7 0.6 -0.2 -0.2 0.6 0.5 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
Select residue pair below:
i_j Score Prob
0050_0071 1.261 0.99
0050_0078 1.222 0.98
0050_0067 1.125 0.97
0050_0087 0.925 0.88
0020_0050 0.892 0.85
Local Interactions:
i_j Score Prob
0050_0052 0.970 0.91
0049_0050 0.861 0.82
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E N R W ...

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