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OPENSEQ.org
HAMP Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0054 0.6 -0.8 -0.2 0.1 0 0.3 -1.5 -0.9 0.7 1.3 0.6 0.8 -0.5 0.6 1.1 0.8 0.4 -0.1 -1.5 -1.3
Select residue pair below:
i_j Score Prob
0050_0054 0.580 0.40
0051_0054 0.564 0.38
Local Interactions:
i_j Score Prob
0052_0054 0.721 0.64
0054_0055 0.703 0.61
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: N N Q V K ...
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