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HAMP Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0003 0.3 -1.1 -0.5 -0.5 -0.7 -0.6 -1.1 -0.1 -0.5 -0.4 0.1 1.7 -0.4 0.5 0.4 1.3 0 -0.5 3.4 -1.1
Select residue pair below:
i_j Score Prob
0003_0037 0.829 0.79
0003_0038 0.625 0.48
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: N N Q V K ...

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