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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0202 0.1 0.7 1.4 1.8 1.7 0.1 -0.5 -0.3 -0.5 -0.3 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0.1 -0.3 -0.5 -0.3
Select residue pair below:
i_j Score Prob
0014_0202 2.483 1.00
0017_0202 1.277 0.76
0011_0202 1.052 0.55
0153_0202 0.895 0.38
0016_0202 0.860 0.35
0102_0202 0.834 0.32
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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