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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0188 0.2 0.7 1.2 1.2 0.8 0.5 -0.1 -0.5 -0.3 -0.5 -0.7 -0.7 -0.7 -0.3 -0.2 -0.1 0.5 -0.2 -0.5 -0.7
Select residue pair below:
i_j Score Prob
0188_0195 1.297 0.78
0180_0188 1.200 0.70
0185_0188 0.990 0.48
0094_0188 0.940 0.43
0188_0192 0.936 0.42
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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