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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0185 0.9 0.5 0.2 1.2 0.1 -0.6 0.3 -0.4 -0.1 -0.6 -0.6 -0.6 -0.4 -0.6 -0.5 0.6 0.5 0.3 -0.3 -0.6
Select residue pair below:
i_j Score Prob
0125_0185 1.116 0.62
0185_0188 0.990 0.48
0179_0185 0.894 0.38
0122_0185 0.841 0.33
0127_0185 0.772 0.26
0185_0192 0.760 0.25
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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