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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0183 0.8 -0.3 -0.4 0.3 -0.1 -0.2 -0.4 -0.4 0.5 0.1 -0.4 -0.3 -0.6 0.3 0.1 0.3 0.2 0.2 0.4 -0.6
Select residue pair below:
i_j Score Prob
0183_0193 1.423 0.86
0117_0183 1.094 0.59
0056_0183 0.847 0.33
0113_0183 0.784 0.28
Local Interactions:
i_j Score Prob
0182_0183 1.269 0.76
0183_0184 1.175 0.67
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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