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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0180 0.8 1.1 1.3 2 1.3 0.7 -0.6 -0.6 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.2 -0.6 -0.3 -0.7 -0.7 -0.1
Select residue pair below:
i_j Score Prob
0180_0188 1.200 0.70
0129_0180 0.950 0.44
0180_0196 0.889 0.37
0060_0180 0.809 0.30
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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