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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0141 0.1 0.4 1.6 1.5 1.5 0.9 -0.5 -0.5 -0.7 -0.7 -0.5 -0.7 -0.7 -0.5 0.4 -0.4 0.6 -0.7 -0.7 -0.7
Select residue pair below:
i_j Score Prob
0047_0141 0.980 0.47
0141_0168 0.903 0.39
0141_0166 0.838 0.32
Local Interactions:
i_j Score Prob
0141_0142 1.010 0.50
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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