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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0132 1.4 0.8 1.6 1.2 1.5 -0.1 -0.5 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.1 0.1 0.7 -0.7 -0.3
Select residue pair below:
i_j Score Prob
0117_0132 1.043 0.54
0031_0132 0.970 0.46
0042_0132 0.902 0.39
0132_0160 0.802 0.29
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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