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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0127 -0.1 1.6 -0.1 0.4 -0.2 -0.3 0.6 1.3 -0.2 -0.5 -0.5 -0.5 -0.4 -0.5 -0.5 0 0.1 0.5 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0107_0127 1.066 0.56
0127_0178 0.840 0.33
0127_0131 0.800 0.29
0127_0196 0.790 0.28
0127_0185 0.772 0.26
0114_0127 0.761 0.26
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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