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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0116 1.1 -0.5 0.4 -0.5 0.2 -0.5 -0.5 -0.5 0.3 0 -0.5 -0.5 -0.2 -0.5 0.3 0.9 1.4 0.7 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0050_0116 1.297 0.78
0116_0178 1.027 0.52
0116_0170 0.878 0.36
0037_0116 0.779 0.27
0116_0200 0.760 0.25
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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