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rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0112 0.4 0.5 -0.1 0.8 -0.3 -0.1 0.2 0.1 -0.3 0 -0.3 -0.3 -0.3 -0.3 -0.1 0.2 0.1 -0.2 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0108_0112 1.471 0.88
0112_0205 1.406 0.85
0076_0112 1.300 0.78
0079_0112 1.288 0.77
0080_0112 1.131 0.63
0112_0208 0.994 0.49
0015_0112 0.919 0.41
0112_0175 0.888 0.37
0109_0112 0.876 0.36
0072_0112 0.861 0.35
0082_0112 0.826 0.31
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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