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rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0108 0.2 0.3 0 0.3 0.2 -0.2 0.4 0.1 -0.2 -0.2 -0.2 0.1 -0.2 -0.1 0.1 -0.1 0.3 -0.2 -0.2 0
Select residue pair below:
i_j Score Prob
0108_0112 1.471 0.88
0080_0108 1.428 0.86
0105_0108 1.421 0.86
0047_0108 1.099 0.60
0015_0108 0.945 0.43
0079_0108 0.836 0.32
0108_0171 0.829 0.32
0108_0175 0.814 0.30
0072_0108 0.786 0.28
0108_0204 0.757 0.25
0108_0111 0.756 0.25
Local Interactions:
i_j Score Prob
0108_0109 1.187 0.69
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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