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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0094 0.5 -0.5 -0.3 -0.3 -0.4 -0.8 -0.8 -0.8 1 0.4 0.3 0.1 -0.7 0.7 -0.3 1.1 0.6 0.3 0.5 -0.8
Select residue pair below:
i_j Score Prob
0037_0094 1.000 0.49
0094_0195 0.943 0.43
0094_0188 0.940 0.43
0088_0094 0.792 0.28
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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