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rhodopsin Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0060 0.9 -0.2 0.4 0 0.7 -0.4 0.2 -0.1 -0.3 -0.7 0.1 -0.4 -0.6 0 -0.3 0.6 0.9 0 -0.7 -0.8
Select residue pair below:
i_j Score Prob
0060_0069 1.725 0.96
0060_0063 1.115 0.62
0060_0067 0.989 0.48
0060_0180 0.809 0.30
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...

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