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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0048 1.7 0.6 0.1 0.2 0 0.1 -0.2 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0.7 0.4 1.3 -0.5 0.3
Select residue pair below:
i_j Score Prob
0016_0048 1.337 0.81
0048_0052 1.023 0.52
0011_0048 0.887 0.37
0012_0048 0.829 0.32
0048_0098 0.817 0.30
0019_0048 0.793 0.28
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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