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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0040 1.2 0.1 -0.1 0.7 0.5 -0.2 -0.3 -0.3 -0.7 -0.3 -0.7 -0.7 -0.2 0.3 -0.5 0.4 0.2 0.2 0.9 -0.7
Select residue pair below:
i_j Score Prob
0040_0086 1.351 0.82
0040_0209 1.247 0.74
0040_0137 1.122 0.62
0022_0040 0.959 0.45
0040_0156 0.926 0.41
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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