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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0028 0.4 -0.1 0.2 0.2 0.8 0 -0.9 -0.8 -0.6 0 0.7 1.2 -0.6 0.2 0.2 0.1 0.8 -0.5 -0.4 -0.7
Select residue pair below:
i_j Score Prob
0028_0147 1.059 0.56
0025_0028 0.885 0.37
Local Interactions:
i_j Score Prob
0028_0030 1.037 0.53
0027_0028 1.015 0.51
0028_0029 0.961 0.45
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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