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OPENSEQ.org
rhodopsin Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 1 0.5 0.5 0.7 0.4 -0.1 0 0.2 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0.3 0.9 -0.3 -0.5 0.1
Select residue pair below:
i_j Score Prob
0012_0052 1.138 0.64
0009_0012 1.098 0.60
0012_0048 0.829 0.32
0012_0091 0.771 0.26
0008_0012 0.770 0.26
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G L T ...
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